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Watching the brain think, all the way down: a rebuilt microscope sees single cells fire through the whole cortex

Deep brain tissue scatters light, so microscopes have mostly watched neurons near the surface — the deep circuits that help turn signals into behaviour stayed blurry. A Rockefeller University team led by Alipasha Vaziri rebuilt the best deep-imaging method, three-photon microscopy, from a clean slate — rethinking how its laser pulses are timed, delivered and scanned — and the new platform, called TrUDI, is about 250 times more efficient. In a paper in Nature Methods, it imaged right through a mouse's entire cortex and recorded single neurons firing in deep regions such as the hippocampus and striatum, without removing any tissue above them and without overheating the brain.

The upbeat factorbrain regions once out of sight are now watchable cell by cell — a clearer view of how thought itself is built.
✓ Verified · Technology Org (Rockefeller University, Nature Methods) · 2026-10-31 · USA
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